Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC27.32■■□□□ 1.96
SPDYE3A6NKU9 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.32■■□□□ 1.96
SPDYE3A6NKU9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SPDYE3A6NKU9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SPDYE3A6NKU9 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPDYE3A6NKU9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC27.31■■□□□ 1.96
SPDYE3A6NKU9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPDYE3A6NKU9 LONRF2P2-201ENST00000439212 571 ntBASIC27.31■■□□□ 1.96
SPDYE3A6NKU9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPDYE3A6NKU9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SPDYE3A6NKU9 KRT8P33-201ENST00000508125 1423 ntBASIC27.31■■□□□ 1.96
SPDYE3A6NKU9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
SPDYE3A6NKU9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 AC019171.1-201ENST00000601251 1056 ntBASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
SPDYE3A6NKU9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
SPDYE3A6NKU9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.29■■□□□ 1.96
SPDYE3A6NKU9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.29■■□□□ 1.96
SPDYE3A6NKU9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SPDYE3A6NKU9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SPDYE3A6NKU9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
SPDYE3A6NKU9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.29■■□□□ 1.96
SPDYE3A6NKU9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC27.29■■□□□ 1.96
SPDYE3A6NKU9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.29■■□□□ 1.96
SPDYE3A6NKU9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPDYE3A6NKU9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SPDYE3A6NKU9 AC010501.1-201ENST00000606270 1962 ntBASIC27.28■■□□□ 1.96
SPDYE3A6NKU9 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPDYE3A6NKU9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.28■■□□□ 1.96
SPDYE3A6NKU9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
SPDYE3A6NKU9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
SPDYE3A6NKU9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.27■■□□□ 1.96
SPDYE3A6NKU9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SPDYE3A6NKU9 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.96
SPDYE3A6NKU9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
SPDYE3A6NKU9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SPDYE3A6NKU9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SPDYE3A6NKU9 YBX1P4-201ENST00000392794 808 ntBASIC27.26■■□□□ 1.95
SPDYE3A6NKU9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SPDYE3A6NKU9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.26■■□□□ 1.95
SPDYE3A6NKU9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SPDYE3A6NKU9 AC096887.2-201ENST00000623443 1957 ntBASIC27.26■■□□□ 1.95
SPDYE3A6NKU9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.25■■□□□ 1.95
SPDYE3A6NKU9 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SPDYE3A6NKU9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.25■■□□□ 1.95
SPDYE3A6NKU9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.25■■□□□ 1.95
SPDYE3A6NKU9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SPDYE3A6NKU9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
SPDYE3A6NKU9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC27.25■■□□□ 1.95
SPDYE3A6NKU9 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
SPDYE3A6NKU9 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
SPDYE3A6NKU9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
SPDYE3A6NKU9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
SPDYE3A6NKU9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SPDYE3A6NKU9 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SPDYE3A6NKU9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
SPDYE3A6NKU9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SPDYE3A6NKU9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
SPDYE3A6NKU9 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.24■■□□□ 1.95
SPDYE3A6NKU9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.23■■□□□ 1.95
SPDYE3A6NKU9 AC103834.1-201ENST00000520383 144 ntBASIC27.23■■□□□ 1.95
SPDYE3A6NKU9 MIR4508-201ENST00000584178 70 ntBASIC27.23■■□□□ 1.95
SPDYE3A6NKU9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
SPDYE3A6NKU9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SPDYE3A6NKU9 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SPDYE3A6NKU9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.22■■□□□ 1.95
SPDYE3A6NKU9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.22■■□□□ 1.95
SPDYE3A6NKU9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SPDYE3A6NKU9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
SPDYE3A6NKU9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SPDYE3A6NKU9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
SPDYE3A6NKU9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.21■■□□□ 1.95
SPDYE3A6NKU9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SPDYE3A6NKU9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.21■■□□□ 1.95
SPDYE3A6NKU9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
SPDYE3A6NKU9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC27.21■■□□□ 1.95
SPDYE3A6NKU9 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.21■■□□□ 1.95
SPDYE3A6NKU9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
SPDYE3A6NKU9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.2■■□□□ 1.95
SPDYE3A6NKU9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPDYE3A6NKU9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPDYE3A6NKU9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPDYE3A6NKU9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SPDYE3A6NKU9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SPDYE3A6NKU9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
SPDYE3A6NKU9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC27.19■■□□□ 1.94
SPDYE3A6NKU9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPDYE3A6NKU9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.18■■□□□ 1.94
SPDYE3A6NKU9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPDYE3A6NKU9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SPDYE3A6NKU9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms