Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CGB1A6NKQ9 SMPD5-203ENST00000639008 1464 ntBASIC19.04■□□□□ 0.64
CGB1A6NKQ9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CGB1A6NKQ9 AC138932.3-201ENST00000567634 1902 ntBASIC19.04■□□□□ 0.64
CGB1A6NKQ9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CGB1A6NKQ9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CGB1A6NKQ9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CGB1A6NKQ9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CGB1A6NKQ9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CGB1A6NKQ9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CGB1A6NKQ9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.03■□□□□ 0.64
CGB1A6NKQ9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CGB1A6NKQ9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
CGB1A6NKQ9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CGB1A6NKQ9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CGB1A6NKQ9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CGB1A6NKQ9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CGB1A6NKQ9 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CGB1A6NKQ9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CGB1A6NKQ9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CGB1A6NKQ9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CGB1A6NKQ9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CGB1A6NKQ9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.02■□□□□ 0.64
CGB1A6NKQ9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CGB1A6NKQ9 MIR3960-201ENST00000583311 91 ntBASIC19.02■□□□□ 0.64
CGB1A6NKQ9 AC022413.1-201ENST00000624602 984 ntBASIC19.02■□□□□ 0.64
CGB1A6NKQ9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CGB1A6NKQ9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.02■□□□□ 0.63
CGB1A6NKQ9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
CGB1A6NKQ9 AC097639.1-201ENST00000565519 1891 ntBASIC19.01■□□□□ 0.63
CGB1A6NKQ9 ECEL1P2-201ENST00000461596 1295 ntBASIC19.01■□□□□ 0.63
CGB1A6NKQ9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CGB1A6NKQ9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CGB1A6NKQ9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CGB1A6NKQ9 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.01■□□□□ 0.63
CGB1A6NKQ9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CGB1A6NKQ9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19■□□□□ 0.63
CGB1A6NKQ9 AC093323.1-202ENST00000635031 2045 ntBASIC19■□□□□ 0.63
CGB1A6NKQ9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CGB1A6NKQ9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CGB1A6NKQ9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CGB1A6NKQ9 MIR4449-201ENST00000578365 66 ntBASIC18.99■□□□□ 0.63
CGB1A6NKQ9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CGB1A6NKQ9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CGB1A6NKQ9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CGB1A6NKQ9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CGB1A6NKQ9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CGB1A6NKQ9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CGB1A6NKQ9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CGB1A6NKQ9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CGB1A6NKQ9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.98■□□□□ 0.63
CGB1A6NKQ9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.98■□□□□ 0.63
CGB1A6NKQ9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CGB1A6NKQ9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CGB1A6NKQ9 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
CGB1A6NKQ9 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGB1A6NKQ9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CGB1A6NKQ9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGB1A6NKQ9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGB1A6NKQ9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.97■□□□□ 0.63
CGB1A6NKQ9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CGB1A6NKQ9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CGB1A6NKQ9 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CGB1A6NKQ9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.96■□□□□ 0.63
CGB1A6NKQ9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.96■□□□□ 0.63
CGB1A6NKQ9 SLC6A10P-202ENST00000431994 2058 ntBASIC18.96■□□□□ 0.63
CGB1A6NKQ9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGB1A6NKQ9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.96■□□□□ 0.63
CGB1A6NKQ9 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGB1A6NKQ9 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.96■□□□□ 0.63
CGB1A6NKQ9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGB1A6NKQ9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CGB1A6NKQ9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGB1A6NKQ9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGB1A6NKQ9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CGB1A6NKQ9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CGB1A6NKQ9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.95■□□□□ 0.62
CGB1A6NKQ9 RP9P-202ENST00000450133 1212 ntBASIC18.95■□□□□ 0.62
CGB1A6NKQ9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGB1A6NKQ9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CGB1A6NKQ9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.95■□□□□ 0.62
CGB1A6NKQ9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.95■□□□□ 0.62
CGB1A6NKQ9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGB1A6NKQ9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CGB1A6NKQ9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB1A6NKQ9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB1A6NKQ9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.94■□□□□ 0.62
CGB1A6NKQ9 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB1A6NKQ9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB1A6NKQ9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB1A6NKQ9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGB1A6NKQ9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CGB1A6NKQ9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CGB1A6NKQ9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB1A6NKQ9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CGB1A6NKQ9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGB1A6NKQ9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CGB1A6NKQ9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CGB1A6NKQ9 AL139125.2-201ENST00000623134 1869 ntBASIC18.93■□□□□ 0.62
CGB1A6NKQ9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms