Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TMEM88BA6NKF7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.53■■■□□ 2.16
TMEM88BA6NKF7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC28.52■■■□□ 2.16
TMEM88BA6NKF7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
TMEM88BA6NKF7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TMEM88BA6NKF7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
TMEM88BA6NKF7 AC105265.2-201ENST00000467189 838 ntBASIC28.52■■■□□ 2.16
TMEM88BA6NKF7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TMEM88BA6NKF7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
TMEM88BA6NKF7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
TMEM88BA6NKF7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC28.52■■■□□ 2.16
TMEM88BA6NKF7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.51■■■□□ 2.15
TMEM88BA6NKF7 EDA-201ENST00000338901 1233 ntBASIC28.51■■■□□ 2.15
TMEM88BA6NKF7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC28.51■■■□□ 2.15
TMEM88BA6NKF7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC28.51■■■□□ 2.15
TMEM88BA6NKF7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.51■■■□□ 2.15
TMEM88BA6NKF7 AL355001.2-201ENST00000620617 1191 ntBASIC28.51■■■□□ 2.15
TMEM88BA6NKF7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TMEM88BA6NKF7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.5■■■□□ 2.15
TMEM88BA6NKF7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TMEM88BA6NKF7 AL162430.1-201ENST00000480705 870 ntBASIC28.5■■■□□ 2.15
TMEM88BA6NKF7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TMEM88BA6NKF7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TMEM88BA6NKF7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
TMEM88BA6NKF7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TMEM88BA6NKF7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TMEM88BA6NKF7 AC097381.1-201ENST00000429019 1296 ntBASIC28.49■■■□□ 2.15
TMEM88BA6NKF7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.49■■■□□ 2.15
TMEM88BA6NKF7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.49■■■□□ 2.15
TMEM88BA6NKF7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
TMEM88BA6NKF7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TMEM88BA6NKF7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
TMEM88BA6NKF7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TMEM88BA6NKF7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
TMEM88BA6NKF7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
TMEM88BA6NKF7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.46■■■□□ 2.15
TMEM88BA6NKF7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC28.46■■■□□ 2.15
TMEM88BA6NKF7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.46■■■□□ 2.15
TMEM88BA6NKF7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.46■■■□□ 2.15
TMEM88BA6NKF7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
TMEM88BA6NKF7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
TMEM88BA6NKF7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TMEM88BA6NKF7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
TMEM88BA6NKF7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
TMEM88BA6NKF7 CD72-202ENST00000378430 585 ntTSL 3 BASIC28.45■■■□□ 2.14
TMEM88BA6NKF7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
TMEM88BA6NKF7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
TMEM88BA6NKF7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC28.45■■■□□ 2.14
TMEM88BA6NKF7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
TMEM88BA6NKF7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
TMEM88BA6NKF7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
TMEM88BA6NKF7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC28.44■■■□□ 2.14
TMEM88BA6NKF7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
TMEM88BA6NKF7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
TMEM88BA6NKF7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.44■■■□□ 2.14
TMEM88BA6NKF7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TMEM88BA6NKF7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
TMEM88BA6NKF7 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
TMEM88BA6NKF7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
TMEM88BA6NKF7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.43■■■□□ 2.14
TMEM88BA6NKF7 AC087623.3-201ENST00000607047 1098 ntBASIC28.43■■■□□ 2.14
TMEM88BA6NKF7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC28.43■■■□□ 2.14
TMEM88BA6NKF7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
TMEM88BA6NKF7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM88BA6NKF7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM88BA6NKF7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM88BA6NKF7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC28.42■■■□□ 2.14
TMEM88BA6NKF7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC28.42■■■□□ 2.14
TMEM88BA6NKF7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
TMEM88BA6NKF7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TMEM88BA6NKF7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
TMEM88BA6NKF7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC28.41■■■□□ 2.14
TMEM88BA6NKF7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
TMEM88BA6NKF7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.41■■■□□ 2.14
TMEM88BA6NKF7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
TMEM88BA6NKF7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
TMEM88BA6NKF7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TMEM88BA6NKF7 AC024257.2-201ENST00000549699 147 ntBASIC28.4■■■□□ 2.14
TMEM88BA6NKF7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TMEM88BA6NKF7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
TMEM88BA6NKF7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TMEM88BA6NKF7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
TMEM88BA6NKF7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.39■■■□□ 2.14
TMEM88BA6NKF7 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.39■■■□□ 2.14
TMEM88BA6NKF7 ABCB10P3-201ENST00000561950 2166 ntBASIC28.39■■■□□ 2.14
TMEM88BA6NKF7 AL136967.2-201ENST00000623968 743 ntBASIC28.39■■■□□ 2.14
TMEM88BA6NKF7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
TMEM88BA6NKF7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC28.38■■■□□ 2.13
TMEM88BA6NKF7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
TMEM88BA6NKF7 AC090192.1-201ENST00000517740 490 ntBASIC28.38■■■□□ 2.13
TMEM88BA6NKF7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
TMEM88BA6NKF7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
TMEM88BA6NKF7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.37■■■□□ 2.13
TMEM88BA6NKF7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.37■■■□□ 2.13
TMEM88BA6NKF7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.37■■■□□ 2.13
TMEM88BA6NKF7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TMEM88BA6NKF7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC28.36■■■□□ 2.13
TMEM88BA6NKF7 ST7-AS1-201ENST00000456775 1889 ntBASIC28.36■■■□□ 2.13
TMEM88BA6NKF7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
TMEM88BA6NKF7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.36■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms