Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MEIS3P1A6NDR6 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MEIS3P1A6NDR6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.35■□□□□ 0.85
MEIS3P1A6NDR6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MEIS3P1A6NDR6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MEIS3P1A6NDR6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MEIS3P1A6NDR6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MEIS3P1A6NDR6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
MEIS3P1A6NDR6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MEIS3P1A6NDR6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MEIS3P1A6NDR6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MEIS3P1A6NDR6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.34■□□□□ 0.85
MEIS3P1A6NDR6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MEIS3P1A6NDR6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MEIS3P1A6NDR6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MEIS3P1A6NDR6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
MEIS3P1A6NDR6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
MEIS3P1A6NDR6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.33■□□□□ 0.85
MEIS3P1A6NDR6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MEIS3P1A6NDR6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MEIS3P1A6NDR6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MEIS3P1A6NDR6 AC087741.3-201ENST00000624270 1347 ntBASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
MEIS3P1A6NDR6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MEIS3P1A6NDR6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MEIS3P1A6NDR6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MEIS3P1A6NDR6 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.31■□□□□ 0.84
MEIS3P1A6NDR6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.31■□□□□ 0.84
MEIS3P1A6NDR6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MEIS3P1A6NDR6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
MEIS3P1A6NDR6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MEIS3P1A6NDR6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.31■□□□□ 0.84
MEIS3P1A6NDR6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
MEIS3P1A6NDR6 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.3■□□□□ 0.84
MEIS3P1A6NDR6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MEIS3P1A6NDR6 AC068473.5-201ENST00000616428 2072 ntBASIC20.3■□□□□ 0.84
MEIS3P1A6NDR6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MEIS3P1A6NDR6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MEIS3P1A6NDR6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MEIS3P1A6NDR6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
MEIS3P1A6NDR6 AC097639.1-201ENST00000565519 1891 ntBASIC20.3■□□□□ 0.84
MEIS3P1A6NDR6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MEIS3P1A6NDR6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MEIS3P1A6NDR6 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MEIS3P1A6NDR6 AP003733.4-201ENST00000623785 1697 ntBASIC20.29■□□□□ 0.84
MEIS3P1A6NDR6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MEIS3P1A6NDR6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
MEIS3P1A6NDR6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
MEIS3P1A6NDR6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MEIS3P1A6NDR6 AC012676.1-201ENST00000574705 1949 ntBASIC20.28■□□□□ 0.84
MEIS3P1A6NDR6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MEIS3P1A6NDR6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MEIS3P1A6NDR6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MEIS3P1A6NDR6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
MEIS3P1A6NDR6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MEIS3P1A6NDR6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MEIS3P1A6NDR6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MEIS3P1A6NDR6 AC021231.2-201ENST00000594613 730 ntBASIC20.27■□□□□ 0.84
MEIS3P1A6NDR6 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MEIS3P1A6NDR6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
MEIS3P1A6NDR6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
MEIS3P1A6NDR6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
MEIS3P1A6NDR6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
MEIS3P1A6NDR6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MEIS3P1A6NDR6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
MEIS3P1A6NDR6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MEIS3P1A6NDR6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.26■□□□□ 0.83
MEIS3P1A6NDR6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MEIS3P1A6NDR6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MEIS3P1A6NDR6 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MEIS3P1A6NDR6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MEIS3P1A6NDR6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MEIS3P1A6NDR6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.25■□□□□ 0.83
MEIS3P1A6NDR6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MEIS3P1A6NDR6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.25■□□□□ 0.83
MEIS3P1A6NDR6 SLC6A10P-202ENST00000431994 2058 ntBASIC20.25■□□□□ 0.83
MEIS3P1A6NDR6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MEIS3P1A6NDR6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MEIS3P1A6NDR6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
MEIS3P1A6NDR6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MEIS3P1A6NDR6 AP006261.1-201ENST00000584783 668 ntBASIC20.24■□□□□ 0.83
MEIS3P1A6NDR6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.24■□□□□ 0.83
MEIS3P1A6NDR6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.24■□□□□ 0.83
MEIS3P1A6NDR6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MEIS3P1A6NDR6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MEIS3P1A6NDR6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.23■□□□□ 0.83
MEIS3P1A6NDR6 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.23■□□□□ 0.83
MEIS3P1A6NDR6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MEIS3P1A6NDR6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 187.8 ms