Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
SH3D21A4FU49 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.03■■□□□ 1.12
SH3D21A4FU49 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3D21A4FU49 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3D21A4FU49 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3D21A4FU49 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SH3D21A4FU49 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3D21A4FU49 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3D21A4FU49 U85056.1-201ENST00000616429 682 ntBASIC22.02■■□□□ 1.12
SH3D21A4FU49 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.02■■□□□ 1.12
SH3D21A4FU49 AC138932.3-201ENST00000567634 1902 ntBASIC22.02■■□□□ 1.11
SH3D21A4FU49 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SH3D21A4FU49 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SH3D21A4FU49 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SH3D21A4FU49 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SH3D21A4FU49 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.01■■□□□ 1.11
SH3D21A4FU49 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.01■■□□□ 1.11
SH3D21A4FU49 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SH3D21A4FU49 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SH3D21A4FU49 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SH3D21A4FU49 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SH3D21A4FU49 ECEL1P2-201ENST00000461596 1295 ntBASIC22■■□□□ 1.11
SH3D21A4FU49 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22■■□□□ 1.11
SH3D21A4FU49 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22■■□□□ 1.11
SH3D21A4FU49 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SH3D21A4FU49 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SH3D21A4FU49 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SH3D21A4FU49 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SH3D21A4FU49 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SH3D21A4FU49 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.99■■□□□ 1.11
SH3D21A4FU49 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SH3D21A4FU49 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SH3D21A4FU49 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
SH3D21A4FU49 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SH3D21A4FU49 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.98■■□□□ 1.11
SH3D21A4FU49 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.98■■□□□ 1.11
SH3D21A4FU49 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.97■■□□□ 1.11
SH3D21A4FU49 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SH3D21A4FU49 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SH3D21A4FU49 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SH3D21A4FU49 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.97■■□□□ 1.11
SH3D21A4FU49 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SH3D21A4FU49 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.96■■□□□ 1.11
SH3D21A4FU49 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.96■■□□□ 1.11
SH3D21A4FU49 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SH3D21A4FU49 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SH3D21A4FU49 AL033527.3-201ENST00000566366 1196 ntBASIC21.96■■□□□ 1.11
SH3D21A4FU49 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.96■■□□□ 1.11
SH3D21A4FU49 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SH3D21A4FU49 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.96■■□□□ 1.11
SH3D21A4FU49 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
SH3D21A4FU49 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SH3D21A4FU49 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3D21A4FU49 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.95■■□□□ 1.1
SH3D21A4FU49 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.95■■□□□ 1.1
SH3D21A4FU49 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SH3D21A4FU49 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SH3D21A4FU49 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3D21A4FU49 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.94■■□□□ 1.1
SH3D21A4FU49 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.94■■□□□ 1.1
SH3D21A4FU49 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SH3D21A4FU49 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3D21A4FU49 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3D21A4FU49 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3D21A4FU49 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SH3D21A4FU49 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SH3D21A4FU49 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SH3D21A4FU49 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.93■■□□□ 1.1
SH3D21A4FU49 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SH3D21A4FU49 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.92■■□□□ 1.1
SH3D21A4FU49 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SH3D21A4FU49 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
SH3D21A4FU49 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH3D21A4FU49 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
SH3D21A4FU49 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.92■■□□□ 1.1
SH3D21A4FU49 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SH3D21A4FU49 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SH3D21A4FU49 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3D21A4FU49 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3D21A4FU49 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3D21A4FU49 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3D21A4FU49 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3D21A4FU49 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3D21A4FU49 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SH3D21A4FU49 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.91■■□□□ 1.1
SH3D21A4FU49 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3D21A4FU49 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3D21A4FU49 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH3D21A4FU49 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH3D21A4FU49 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3D21A4FU49 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3D21A4FU49 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.9■■□□□ 1.1
SH3D21A4FU49 KRT18P60-201ENST00000312876 1297 ntBASIC21.9■■□□□ 1.1
SH3D21A4FU49 AL157400.5-201ENST00000507624 621 ntBASIC21.9■■□□□ 1.1
SH3D21A4FU49 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH3D21A4FU49 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SH3D21A4FU49 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH3D21A4FU49 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.88■■□□□ 1.09
SH3D21A4FU49 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH3D21A4FU49 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms