Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 MIR4281-201ENST00000580852 62 ntBASIC32.98■■■□□ 2.87
SBNO1A3KN83 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC32.98■■■□□ 2.87
SBNO1A3KN83 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
SBNO1A3KN83 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
SBNO1A3KN83 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC32.97■■■□□ 2.87
SBNO1A3KN83 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC32.97■■■□□ 2.87
SBNO1A3KN83 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC32.97■■■□□ 2.87
SBNO1A3KN83 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC32.96■■■□□ 2.87
SBNO1A3KN83 AC139426.1-201ENST00000568218 2529 ntBASIC32.96■■■□□ 2.87
SBNO1A3KN83 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
SBNO1A3KN83 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
SBNO1A3KN83 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
SBNO1A3KN83 MIR3621-201ENST00000580529 85 ntBASIC32.96■■■□□ 2.87
SBNO1A3KN83 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC32.96■■■□□ 2.87
SBNO1A3KN83 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
SBNO1A3KN83 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
SBNO1A3KN83 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC32.95■■■□□ 2.86
SBNO1A3KN83 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC32.95■■■□□ 2.86
SBNO1A3KN83 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SBNO1A3KN83 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
SBNO1A3KN83 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC32.94■■■□□ 2.86
SBNO1A3KN83 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
SBNO1A3KN83 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
SBNO1A3KN83 AL449106.1-201ENST00000608517 1980 ntBASIC32.93■■■□□ 2.86
SBNO1A3KN83 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC32.93■■■□□ 2.86
SBNO1A3KN83 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC32.93■■■□□ 2.86
SBNO1A3KN83 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
SBNO1A3KN83 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC32.93■■■□□ 2.86
SBNO1A3KN83 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.92■■■□□ 2.86
SBNO1A3KN83 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC32.92■■■□□ 2.86
SBNO1A3KN83 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
SBNO1A3KN83 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SBNO1A3KN83 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SBNO1A3KN83 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.91■■■□□ 2.86
SBNO1A3KN83 LINC01003-201ENST00000564834 1764 ntBASIC32.91■■■□□ 2.86
SBNO1A3KN83 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
SBNO1A3KN83 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC32.9■■■□□ 2.86
SBNO1A3KN83 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
SBNO1A3KN83 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC32.9■■■□□ 2.86
SBNO1A3KN83 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SBNO1A3KN83 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.9■■■□□ 2.86
SBNO1A3KN83 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC32.9■■■□□ 2.86
SBNO1A3KN83 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC32.89■■■□□ 2.86
SBNO1A3KN83 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
SBNO1A3KN83 MIR6724-1-201ENST00000616420 92 ntBASIC32.89■■■□□ 2.86
SBNO1A3KN83 MIR6724-2-201ENST00000616483 92 ntBASIC32.89■■■□□ 2.86
SBNO1A3KN83 MIR6724-4-201ENST00000617390 92 ntBASIC32.89■■■□□ 2.86
SBNO1A3KN83 MIR6724-3-201ENST00000622482 92 ntBASIC32.89■■■□□ 2.86
SBNO1A3KN83 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC32.89■■■□□ 2.86
SBNO1A3KN83 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC32.89■■■□□ 2.85
SBNO1A3KN83 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC32.89■■■□□ 2.85
SBNO1A3KN83 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
SBNO1A3KN83 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC32.88■■■□□ 2.85
SBNO1A3KN83 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
SBNO1A3KN83 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC32.88■■■□□ 2.85
SBNO1A3KN83 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC32.88■■■□□ 2.85
SBNO1A3KN83 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
SBNO1A3KN83 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC32.88■■■□□ 2.85
SBNO1A3KN83 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC32.88■■■□□ 2.85
SBNO1A3KN83 AC010997.5-201ENST00000609182 354 ntBASIC32.87■■■□□ 2.85
SBNO1A3KN83 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
SBNO1A3KN83 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC32.86■■■□□ 2.85
SBNO1A3KN83 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC32.86■■■□□ 2.85
SBNO1A3KN83 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC32.86■■■□□ 2.85
SBNO1A3KN83 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
SBNO1A3KN83 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC32.85■■■□□ 2.85
SBNO1A3KN83 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
SBNO1A3KN83 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
SBNO1A3KN83 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SBNO1A3KN83 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC32.85■■■□□ 2.85
SBNO1A3KN83 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC32.85■■■□□ 2.85
SBNO1A3KN83 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC32.84■■■□□ 2.85
SBNO1A3KN83 MIR4466-201ENST00000606121 54 ntBASIC32.84■■■□□ 2.85
SBNO1A3KN83 AC005837.3-201ENST00000612163 286 ntBASIC32.84■■■□□ 2.85
SBNO1A3KN83 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC32.84■■■□□ 2.85
SBNO1A3KN83 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
SBNO1A3KN83 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC32.84■■■□□ 2.85
SBNO1A3KN83 LSM4-201ENST00000252816 986 ntTSL 2 BASIC32.83■■■□□ 2.85
SBNO1A3KN83 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SBNO1A3KN83 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC32.83■■■□□ 2.85
SBNO1A3KN83 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
SBNO1A3KN83 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC32.83■■■□□ 2.85
SBNO1A3KN83 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SBNO1A3KN83 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SBNO1A3KN83 SENP5-202ENST00000419026 973 ntTSL 3 BASIC32.83■■■□□ 2.85
SBNO1A3KN83 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC32.82■■■□□ 2.85
SBNO1A3KN83 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC32.82■■■□□ 2.84
SBNO1A3KN83 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SBNO1A3KN83 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC32.82■■■□□ 2.84
SBNO1A3KN83 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC32.82■■■□□ 2.84
SBNO1A3KN83 AC133561.4-201ENST00000566112 224 ntBASIC32.82■■■□□ 2.84
SBNO1A3KN83 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SBNO1A3KN83 AC096631.2-201ENST00000436136 790 ntBASIC32.81■■■□□ 2.84
SBNO1A3KN83 MTDHP2-201ENST00000601468 714 ntBASIC32.81■■■□□ 2.84
SBNO1A3KN83 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC32.81■■■□□ 2.84
SBNO1A3KN83 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
SBNO1A3KN83 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
SBNO1A3KN83 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.8■■■□□ 2.84
SBNO1A3KN83 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
SBNO1A3KN83 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC32.8■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms