Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRBV4S1A1TA0A5B7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.14■□□□□ 0.65
TCRBV4S1A1TA0A5B7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV4S1A1TA0A5B7 RAP2CP1-202ENST00000605179 643 ntBASIC19.13■□□□□ 0.65
TCRBV4S1A1TA0A5B7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.13■□□□□ 0.65
TCRBV4S1A1TA0A5B7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
TCRBV4S1A1TA0A5B7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV4S1A1TA0A5B7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV4S1A1TA0A5B7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV4S1A1TA0A5B7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TCRBV4S1A1TA0A5B7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV4S1A1TA0A5B7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.12■□□□□ 0.65
TCRBV4S1A1TA0A5B7 BHLHE23-202ENST00000612929 1109 ntBASIC19.12■□□□□ 0.65
TCRBV4S1A1TA0A5B7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TCRBV4S1A1TA0A5B7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV4S1A1TA0A5B7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV4S1A1TA0A5B7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV4S1A1TA0A5B7 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TCRBV4S1A1TA0A5B7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV4S1A1TA0A5B7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
TCRBV4S1A1TA0A5B7 DUX4L9-201ENST00000449051 1259 ntBASIC19.1■□□□□ 0.65
TCRBV4S1A1TA0A5B7 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.1■□□□□ 0.65
TCRBV4S1A1TA0A5B7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
TCRBV4S1A1TA0A5B7 AC010501.1-201ENST00000606270 1962 ntBASIC19.1■□□□□ 0.65
TCRBV4S1A1TA0A5B7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV4S1A1TA0A5B7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TCRBV4S1A1TA0A5B7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV4S1A1TA0A5B7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV4S1A1TA0A5B7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.09■□□□□ 0.65
TCRBV4S1A1TA0A5B7 AC018755.3-202ENST00000596210 929 ntBASIC19.09■□□□□ 0.65
TCRBV4S1A1TA0A5B7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TCRBV4S1A1TA0A5B7 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV4S1A1TA0A5B7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.08■□□□□ 0.65
TCRBV4S1A1TA0A5B7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TCRBV4S1A1TA0A5B7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV4S1A1TA0A5B7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV4S1A1TA0A5B7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.08■□□□□ 0.64
TCRBV4S1A1TA0A5B7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV4S1A1TA0A5B7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TCRBV4S1A1TA0A5B7 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.07■□□□□ 0.64
TCRBV4S1A1TA0A5B7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV4S1A1TA0A5B7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.07■□□□□ 0.64
TCRBV4S1A1TA0A5B7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TCRBV4S1A1TA0A5B7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
TCRBV4S1A1TA0A5B7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TCRBV4S1A1TA0A5B7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.06■□□□□ 0.64
TCRBV4S1A1TA0A5B7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV4S1A1TA0A5B7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV4S1A1TA0A5B7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV4S1A1TA0A5B7 RARRES2P1-201ENST00000474487 481 ntBASIC19.06■□□□□ 0.64
TCRBV4S1A1TA0A5B7 AC139795.1-202ENST00000500444 432 ntBASIC19.06■□□□□ 0.64
TCRBV4S1A1TA0A5B7 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TCRBV4S1A1TA0A5B7 MIR6765-201ENST00000614092 87 ntBASIC19.06■□□□□ 0.64
TCRBV4S1A1TA0A5B7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.05■□□□□ 0.64
TCRBV4S1A1TA0A5B7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV4S1A1TA0A5B7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.05■□□□□ 0.64
TCRBV4S1A1TA0A5B7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.05■□□□□ 0.64
TCRBV4S1A1TA0A5B7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV4S1A1TA0A5B7 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.05■□□□□ 0.64
TCRBV4S1A1TA0A5B7 ERN1-208ENST00000606895 2068 ntBASIC19.05■□□□□ 0.64
TCRBV4S1A1TA0A5B7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV4S1A1TA0A5B7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV4S1A1TA0A5B7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
TCRBV4S1A1TA0A5B7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV4S1A1TA0A5B7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV4S1A1TA0A5B7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV4S1A1TA0A5B7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV4S1A1TA0A5B7 SPCS2P3-201ENST00000500401 656 ntBASIC19.03■□□□□ 0.64
TCRBV4S1A1TA0A5B7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TCRBV4S1A1TA0A5B7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.03■□□□□ 0.64
TCRBV4S1A1TA0A5B7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV4S1A1TA0A5B7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV4S1A1TA0A5B7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV4S1A1TA0A5B7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV4S1A1TA0A5B7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV4S1A1TA0A5B7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
TCRBV4S1A1TA0A5B7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV4S1A1TA0A5B7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV4S1A1TA0A5B7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV4S1A1TA0A5B7 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV4S1A1TA0A5B7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV4S1A1TA0A5B7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.01■□□□□ 0.63
TCRBV4S1A1TA0A5B7 AC093323.1-202ENST00000635031 2045 ntBASIC19.01■□□□□ 0.63
TCRBV4S1A1TA0A5B7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV4S1A1TA0A5B7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV4S1A1TA0A5B7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV4S1A1TA0A5B7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV4S1A1TA0A5B7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TCRBV4S1A1TA0A5B7 AC074183.2-201ENST00000623112 922 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms