Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.25■□□□□ 0.35
IGHV4-28A0A0C4DH34 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.25■□□□□ 0.35
IGHV4-28A0A0C4DH34 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
IGHV4-28A0A0C4DH34 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV4-28A0A0C4DH34 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.24■□□□□ 0.35
IGHV4-28A0A0C4DH34 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV4-28A0A0C4DH34 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV4-28A0A0C4DH34 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.24■□□□□ 0.35
IGHV4-28A0A0C4DH34 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.24■□□□□ 0.35
IGHV4-28A0A0C4DH34 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV4-28A0A0C4DH34 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV4-28A0A0C4DH34 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGHV4-28A0A0C4DH34 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.24■□□□□ 0.35
IGHV4-28A0A0C4DH34 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
IGHV4-28A0A0C4DH34 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
IGHV4-28A0A0C4DH34 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV4-28A0A0C4DH34 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV4-28A0A0C4DH34 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.23■□□□□ 0.35
IGHV4-28A0A0C4DH34 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.23■□□□□ 0.35
IGHV4-28A0A0C4DH34 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.23■□□□□ 0.35
IGHV4-28A0A0C4DH34 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC17.23■□□□□ 0.35
IGHV4-28A0A0C4DH34 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGHV4-28A0A0C4DH34 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV4-28A0A0C4DH34 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.22■□□□□ 0.35
IGHV4-28A0A0C4DH34 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
IGHV4-28A0A0C4DH34 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.22■□□□□ 0.35
IGHV4-28A0A0C4DH34 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV4-28A0A0C4DH34 LONRF2P2-201ENST00000439212 571 ntBASIC17.22■□□□□ 0.35
IGHV4-28A0A0C4DH34 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.22■□□□□ 0.35
IGHV4-28A0A0C4DH34 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV4-28A0A0C4DH34 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV4-28A0A0C4DH34 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IGHV4-28A0A0C4DH34 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IGHV4-28A0A0C4DH34 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGHV4-28A0A0C4DH34 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.21■□□□□ 0.35
IGHV4-28A0A0C4DH34 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
IGHV4-28A0A0C4DH34 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
IGHV4-28A0A0C4DH34 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.21■□□□□ 0.35
IGHV4-28A0A0C4DH34 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
IGHV4-28A0A0C4DH34 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV4-28A0A0C4DH34 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV4-28A0A0C4DH34 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
IGHV4-28A0A0C4DH34 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.2■□□□□ 0.34
IGHV4-28A0A0C4DH34 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV4-28A0A0C4DH34 AC103834.1-201ENST00000520383 144 ntBASIC17.2■□□□□ 0.34
IGHV4-28A0A0C4DH34 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGHV4-28A0A0C4DH34 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
IGHV4-28A0A0C4DH34 AC019171.1-201ENST00000601251 1056 ntBASIC17.2■□□□□ 0.34
IGHV4-28A0A0C4DH34 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.2■□□□□ 0.34
IGHV4-28A0A0C4DH34 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV4-28A0A0C4DH34 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV4-28A0A0C4DH34 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.19■□□□□ 0.34
IGHV4-28A0A0C4DH34 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV4-28A0A0C4DH34 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IGHV4-28A0A0C4DH34 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.19■□□□□ 0.34
IGHV4-28A0A0C4DH34 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.19■□□□□ 0.34
IGHV4-28A0A0C4DH34 MIR4508-201ENST00000584178 70 ntBASIC17.19■□□□□ 0.34
IGHV4-28A0A0C4DH34 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV4-28A0A0C4DH34 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
IGHV4-28A0A0C4DH34 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGHV4-28A0A0C4DH34 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
IGHV4-28A0A0C4DH34 ERN1-208ENST00000606895 2068 ntBASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
IGHV4-28A0A0C4DH34 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.16■□□□□ 0.34
IGHV4-28A0A0C4DH34 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV4-28A0A0C4DH34 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV4-28A0A0C4DH34 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.16■□□□□ 0.34
IGHV4-28A0A0C4DH34 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV4-28A0A0C4DH34 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV4-28A0A0C4DH34 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV4-28A0A0C4DH34 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IGHV4-28A0A0C4DH34 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV4-28A0A0C4DH34 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV4-28A0A0C4DH34 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGHV4-28A0A0C4DH34 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
IGHV4-28A0A0C4DH34 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms