Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-2A0A0B4J237 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-2A0A0B4J237 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TRAV8-2A0A0B4J237 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-2A0A0B4J237 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-2A0A0B4J237 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-2A0A0B4J237 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-2A0A0B4J237 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.07■□□□□ 0.48
TRAV8-2A0A0B4J237 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV8-2A0A0B4J237 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-2A0A0B4J237 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-2A0A0B4J237 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-2A0A0B4J237 AC093323.1-202ENST00000635031 2045 ntBASIC18.06■□□□□ 0.48
TRAV8-2A0A0B4J237 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-2A0A0B4J237 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
TRAV8-2A0A0B4J237 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-2A0A0B4J237 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRAV8-2A0A0B4J237 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-2A0A0B4J237 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.05■□□□□ 0.48
TRAV8-2A0A0B4J237 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-2A0A0B4J237 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRAV8-2A0A0B4J237 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-2A0A0B4J237 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV8-2A0A0B4J237 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-2A0A0B4J237 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV8-2A0A0B4J237 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-2A0A0B4J237 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-2A0A0B4J237 AC097639.1-201ENST00000565519 1891 ntBASIC18.04■□□□□ 0.48
TRAV8-2A0A0B4J237 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
TRAV8-2A0A0B4J237 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV8-2A0A0B4J237 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV8-2A0A0B4J237 AC092296.2-201ENST00000589470 999 ntBASIC18.04■□□□□ 0.48
TRAV8-2A0A0B4J237 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-2A0A0B4J237 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.03■□□□□ 0.48
TRAV8-2A0A0B4J237 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-2A0A0B4J237 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV8-2A0A0B4J237 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV8-2A0A0B4J237 SMPD5-203ENST00000639008 1464 ntBASIC18.02■□□□□ 0.48
TRAV8-2A0A0B4J237 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-2A0A0B4J237 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-2A0A0B4J237 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV8-2A0A0B4J237 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV8-2A0A0B4J237 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.02■□□□□ 0.48
TRAV8-2A0A0B4J237 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRAV8-2A0A0B4J237 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.02■□□□□ 0.48
TRAV8-2A0A0B4J237 MIR3960-201ENST00000583311 91 ntBASIC18.02■□□□□ 0.48
TRAV8-2A0A0B4J237 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.02■□□□□ 0.48
TRAV8-2A0A0B4J237 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.02■□□□□ 0.47
TRAV8-2A0A0B4J237 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.02■□□□□ 0.47
TRAV8-2A0A0B4J237 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV8-2A0A0B4J237 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-2A0A0B4J237 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-2A0A0B4J237 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-2A0A0B4J237 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-2A0A0B4J237 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-2A0A0B4J237 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-2A0A0B4J237 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV8-2A0A0B4J237 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV8-2A0A0B4J237 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
TRAV8-2A0A0B4J237 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-2A0A0B4J237 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-2A0A0B4J237 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
TRAV8-2A0A0B4J237 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-2A0A0B4J237 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-2A0A0B4J237 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-2A0A0B4J237 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-2A0A0B4J237 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV8-2A0A0B4J237 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
TRAV8-2A0A0B4J237 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 AL139125.2-201ENST00000623134 1869 ntBASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV8-2A0A0B4J237 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 SLC6A10P-202ENST00000431994 2058 ntBASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV8-2A0A0B4J237 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV8-2A0A0B4J237 ECEL1P2-201ENST00000461596 1295 ntBASIC17.97■□□□□ 0.47
TRAV8-2A0A0B4J237 AC022413.1-201ENST00000624602 984 ntBASIC17.97■□□□□ 0.47
TRAV8-2A0A0B4J237 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAV8-2A0A0B4J237 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-2A0A0B4J237 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-2A0A0B4J237 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV8-2A0A0B4J237 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms