Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 LINC00273-201ENST00000539813 1452 ntBASIC17.56■□□□□ 0.4
TRAV9-2A0A087WT02 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 DUX4L11-201ENST00000611504 1267 ntBASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 DUX4L12-201ENST00000614593 1267 ntBASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 DUX4L14-201ENST00000621227 1267 ntBASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV9-2A0A087WT02 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV9-2A0A087WT02 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV9-2A0A087WT02 AC127502.1-201ENST00000399971 1502 ntBASIC17.54■□□□□ 0.4
TRAV9-2A0A087WT02 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV9-2A0A087WT02 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV9-2A0A087WT02 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV9-2A0A087WT02 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRAV9-2A0A087WT02 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TRAV9-2A0A087WT02 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-2A0A087WT02 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-2A0A087WT02 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRAV9-2A0A087WT02 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV9-2A0A087WT02 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-2A0A087WT02 DUSP8P5-201ENST00000422884 1815 ntBASIC17.53■□□□□ 0.4
TRAV9-2A0A087WT02 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-2A0A087WT02 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-2A0A087WT02 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV9-2A0A087WT02 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.53■□□□□ 0.4
TRAV9-2A0A087WT02 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV9-2A0A087WT02 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 AC097639.1-201ENST00000565519 1891 ntBASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 AC022211.4-201ENST00000625094 2161 ntBASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 HLA-V-202ENST00000446817 847 ntBASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV9-2A0A087WT02 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV9-2A0A087WT02 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TRAV9-2A0A087WT02 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV9-2A0A087WT02 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV9-2A0A087WT02 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRAV9-2A0A087WT02 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV9-2A0A087WT02 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV9-2A0A087WT02 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.51■□□□□ 0.39
TRAV9-2A0A087WT02 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV9-2A0A087WT02 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV9-2A0A087WT02 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV9-2A0A087WT02 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-2A0A087WT02 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRAV9-2A0A087WT02 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-2A0A087WT02 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-2A0A087WT02 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV9-2A0A087WT02 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-2A0A087WT02 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-2A0A087WT02 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-2A0A087WT02 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-2A0A087WT02 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV9-2A0A087WT02 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 DUX4L13-201ENST00000554103 1267 ntBASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 DUX4L15-201ENST00000611059 1267 ntBASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 DUX4L23-201ENST00000615195 1269 ntBASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 DUX4L24-201ENST00000617576 1269 ntBASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 DUX4L22-201ENST00000618238 1269 ntBASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 DUX4L20-201ENST00000619712 1269 ntBASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 DUX4L21-201ENST00000622058 1269 ntBASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 DUX4L10-201ENST00000622460 1267 ntBASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 DUX4L25-201ENST00000624915 1269 ntBASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 WHAMMP3-201ENST00000611636 1609 ntBASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 AP002414.2-202ENST00000590929 1450 ntBASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV9-2A0A087WT02 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-2A0A087WT02 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-2A0A087WT02 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TRAV9-2A0A087WT02 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV9-2A0A087WT02 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms