Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV30A0A087WSZ9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV30A0A087WSZ9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV30A0A087WSZ9 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV30A0A087WSZ9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV30A0A087WSZ9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV30A0A087WSZ9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV30A0A087WSZ9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRAV30A0A087WSZ9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV30A0A087WSZ9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV30A0A087WSZ9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV30A0A087WSZ9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV30A0A087WSZ9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV30A0A087WSZ9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRAV30A0A087WSZ9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV30A0A087WSZ9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV30A0A087WSZ9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV30A0A087WSZ9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV30A0A087WSZ9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV30A0A087WSZ9 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV30A0A087WSZ9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV30A0A087WSZ9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
TRAV30A0A087WSZ9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRAV30A0A087WSZ9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV30A0A087WSZ9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV30A0A087WSZ9 AC097639.1-201ENST00000565519 1891 ntBASIC18.64■□□□□ 0.57
TRAV30A0A087WSZ9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 AC025884.2-201ENST00000553429 711 ntBASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 AC060814.1-201ENST00000554326 538 ntBASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV30A0A087WSZ9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV30A0A087WSZ9 MIR639-201ENST00000384974 98 ntBASIC18.62■□□□□ 0.57
TRAV30A0A087WSZ9 SMPD5-203ENST00000639008 1464 ntBASIC18.62■□□□□ 0.57
TRAV30A0A087WSZ9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRAV30A0A087WSZ9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV30A0A087WSZ9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV30A0A087WSZ9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV30A0A087WSZ9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV30A0A087WSZ9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV30A0A087WSZ9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV30A0A087WSZ9 AC022211.4-201ENST00000625094 2161 ntBASIC18.61■□□□□ 0.57
TRAV30A0A087WSZ9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV30A0A087WSZ9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TRAV30A0A087WSZ9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV30A0A087WSZ9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV30A0A087WSZ9 AL157400.5-201ENST00000507624 621 ntBASIC18.6■□□□□ 0.57
TRAV30A0A087WSZ9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV30A0A087WSZ9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV30A0A087WSZ9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV30A0A087WSZ9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV30A0A087WSZ9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV30A0A087WSZ9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV30A0A087WSZ9 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV30A0A087WSZ9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV30A0A087WSZ9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV30A0A087WSZ9 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV30A0A087WSZ9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV30A0A087WSZ9 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV30A0A087WSZ9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV30A0A087WSZ9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRAV30A0A087WSZ9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAV30A0A087WSZ9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
TRAV30A0A087WSZ9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV30A0A087WSZ9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 ECEL1P2-201ENST00000461596 1295 ntBASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRAV30A0A087WSZ9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV30A0A087WSZ9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.56■□□□□ 0.56
TRAV30A0A087WSZ9 AC092296.2-201ENST00000589470 999 ntBASIC18.56■□□□□ 0.56
TRAV30A0A087WSZ9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV30A0A087WSZ9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV30A0A087WSZ9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV30A0A087WSZ9 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV30A0A087WSZ9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
TRAV30A0A087WSZ9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV30A0A087WSZ9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV30A0A087WSZ9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV30A0A087WSZ9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV30A0A087WSZ9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.55■□□□□ 0.56
TRAV30A0A087WSZ9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV30A0A087WSZ9 AP003733.4-201ENST00000623785 1697 ntBASIC18.54■□□□□ 0.56
TRAV30A0A087WSZ9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV30A0A087WSZ9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms