Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
HLA-DRB4X5D2U9 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
HLA-DRB4X5D2U9 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
HLA-DRB4X5D2U9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
HLA-DRB4X5D2U9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
HLA-DRB4X5D2U9 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 AC136632.2-201ENST00000512891 861 ntBASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 TERC-201ENST00000602385 541 ntBASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 AL031008.1-201ENST00000619963 541 ntBASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 MIR1199-201ENST00000621445 119 ntBASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 AC008735.5-201ENST00000623544 497 ntBASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 AF228730.7-201ENST00000641842 219 ntBASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 CYP2T1P-202ENST00000641596 2535 ntBASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 AC006504.4-201ENST00000592118 1568 ntBASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 AC063926.3-201ENST00000624734 5658 ntBASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
HLA-DRB4X5D2U9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 KRT18P27-201ENST00000427733 1299 ntBASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 TPM4P1-201ENST00000436100 807 ntBASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 AC079781.3-201ENST00000449110 356 ntBASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HLA-DRB4X5D2U9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms