Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB2Q9Y5E7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 TUBB8P12-201ENST00000308911 1335 ntBASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 TUBB7P-202ENST00000428444 1305 ntBASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 TUBB8P7-204ENST00000567960 1332 ntBASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 MIR770-201ENST00000390219 98 ntBASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 IGHV3-62-201ENST00000520057 340 ntBASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 MIR4492-201ENST00000581627 80 ntBASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 CYP2A7P1-201ENST00000595391 815 ntBASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 AC093512.1-201ENST00000617969 520 ntBASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB2Q9Y5E7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 AGGF1P2-201ENST00000426656 2106 ntBASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB2Q9Y5E7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 UXT-AS1-201ENST00000590504 1525 ntBASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB2Q9Y5E7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms