Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 AC009336.1-201ENST00000608941 1553 ntBASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
KCNIP3Q9Y2W7 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 FAM220CP-201ENST00000395253 831 ntBASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 AC008550.1-201ENST00000511500 884 ntBASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 AL023973.1-201ENST00000624619 620 ntBASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 KRT18P22-201ENST00000402024 1347 ntBASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KCNIP3Q9Y2W7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 STARP1-201ENST00000397973 869 ntBASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 AC005332.3-201ENST00000589904 676 ntBASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.03□□□□□ -0.16
KCNIP3Q9Y2W7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms