Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 SPDYE15P-201ENST00000424157 909 ntBASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 AL023973.1-201ENST00000624619 620 ntBASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 PC-204ENST00000524491 1714 ntTSL 2 BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RCL1Q9Y2P8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 AC103564.2-201ENST00000432853 1299 ntBASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 AC099063.4-201ENST00000641099 1602 ntBASIC13.72□□□□□ -0.21
RCL1Q9Y2P8 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RCL1Q9Y2P8 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms