Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 BCAR1-209ENST00000546196 1340 ntBASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 AC129492.6-201ENST00000611383 1305 ntBASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RPH3AQ9Y2J0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 AC096734.2-201ENST00000562054 433 ntBASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 AC040169.1-201ENST00000565382 521 ntBASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 MIR3687-2-201ENST00000577708 61 ntBASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 MIR3687-1-201ENST00000614492 61 ntBASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 AC022211.2-201ENST00000585075 2527 ntBASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
RPH3AQ9Y2J0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 YBX2P1-201ENST00000394192 760 ntBASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 AC107918.2-201ENST00000530817 355 ntBASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 AL513190.1-201ENST00000621254 727 ntBASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 AC134684.3-201ENST00000641758 218 ntBASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 AC092865.6-201ENST00000642101 219 ntBASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 AL021920.2-201ENST00000624828 1351 ntBASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
RPH3AQ9Y2J0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 AC025580.3-201ENST00000617932 1424 ntBASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RPH3AQ9Y2J0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms