Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
FNDC3AQ9Y2H6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 MIR770-201ENST00000390219 98 ntBASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 FAM58CP-201ENST00000435741 640 ntBASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 OR7E47P-204ENST00000575924 449 ntBASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 AC092364.2-202ENST00000597012 1073 ntBASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 AC005915.1-201ENST00000624912 2018 ntBASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNDC3AQ9Y2H6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 TSEN15P1-201ENST00000423257 515 ntBASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNDC3AQ9Y2H6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC3AQ9Y2H6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC3AQ9Y2H6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FNDC3AQ9Y2H6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
FNDC3AQ9Y2H6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.09■□□□□ 0.33
FNDC3AQ9Y2H6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms