Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCE1Q9Y256 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 AC009078.2-202ENST00000463353 338 ntBASIC15.15■□□□□ 0.02
RCE1Q9Y256 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.15■□□□□ 0.02
RCE1Q9Y256 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCE1Q9Y256 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCE1Q9Y256 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCE1Q9Y256 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 AC092053.1-201ENST00000605787 1936 ntBASIC15.15■□□□□ 0.02
RCE1Q9Y256 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCE1Q9Y256 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCE1Q9Y256 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCE1Q9Y256 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCE1Q9Y256 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCE1Q9Y256 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCE1Q9Y256 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.15■□□□□ 0.02
RCE1Q9Y256 PI4KAP1-204ENST00000612579 1703 ntBASIC15.14■□□□□ 0.01
RCE1Q9Y256 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 RNA5SP419-201ENST00000515908 135 ntBASIC15.14■□□□□ 0.01
RCE1Q9Y256 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 AC012640.2-201ENST00000561606 901 ntBASIC15.14■□□□□ 0.01
RCE1Q9Y256 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RCE1Q9Y256 AP002414.3-201ENST00000589352 1468 ntBASIC15.14■□□□□ 0.01
RCE1Q9Y256 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.14■□□□□ 0.01
RCE1Q9Y256 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 AC006449.5-201ENST00000610658 2098 ntBASIC15.13■□□□□ 0.01
RCE1Q9Y256 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RCE1Q9Y256 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RCE1Q9Y256 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 1266.5 ms