Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRFN1Q9P244 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
LRFN1Q9P244 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 FAM86GP-201ENST00000448322 971 ntBASIC15.32■□□□□ 0.04
LRFN1Q9P244 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 AC092068.3-201ENST00000587894 2016 ntBASIC15.32■□□□□ 0.04
LRFN1Q9P244 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LRFN1Q9P244 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRFN1Q9P244 AC016027.1-202ENST00000607927 1699 ntBASIC15.32■□□□□ 0.04
LRFN1Q9P244 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRFN1Q9P244 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRFN1Q9P244 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRFN1Q9P244 FAM58DP-201ENST00000428076 619 ntBASIC15.31■□□□□ 0.04
LRFN1Q9P244 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 AC093512.1-201ENST00000617969 520 ntBASIC15.31■□□□□ 0.04
LRFN1Q9P244 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRFN1Q9P244 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRFN1Q9P244 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRFN1Q9P244 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRFN1Q9P244 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.31■□□□□ 0.04
LRFN1Q9P244 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 MIR770-201ENST00000390219 98 ntBASIC15.3■□□□□ 0.04
LRFN1Q9P244 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 RBPMS2P1-201ENST00000437762 623 ntBASIC15.3■□□□□ 0.04
LRFN1Q9P244 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LRFN1Q9P244 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.3■□□□□ 0.04
LRFN1Q9P244 LINC01225-203ENST00000563550 1244 ntBASIC15.3■□□□□ 0.04
LRFN1Q9P244 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms