Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 AC099522.2-201ENST00000607001 744 ntBASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
ECHDC1Q9NTX5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 MTDHP5-201ENST00000598980 586 ntBASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 C20orf181-201ENST00000623918 480 ntBASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 AC092902.6-201ENST00000641783 218 ntBASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
ECHDC1Q9NTX5 AL118508.1-201ENST00000613502 2345 ntBASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 ME2P1-201ENST00000426028 1970 ntBASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 FAM58CP-201ENST00000435741 640 ntBASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 AC020765.3-201ENST00000613051 740 ntBASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 PCGF3-213ENST00000620529 1899 ntBASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 AC005052.1-201ENST00000625181 2492 ntBASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
ECHDC1Q9NTX5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 AL078644.1-201ENST00000609881 752 ntBASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 AL161645.1-201ENST00000622716 1255 ntBASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.27■□□□□ 0.84
ECHDC1Q9NTX5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ECHDC1Q9NTX5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
ECHDC1Q9NTX5 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms