Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 AC003101.2-201ENST00000612557 442 ntBASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 AC005915.1-201ENST00000624912 2018 ntBASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PDLIM7Q9NR12 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 AC080080.1-201ENST00000625121 2420 ntBASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 KRT8P39-201ENST00000396270 1433 ntBASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 AC008738.7-201ENST00000609744 511 ntBASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 IGHV3-72-202ENST00000621503 303 ntBASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.53■□□□□ 0.56
PDLIM7Q9NR12 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 AP002490.2-201ENST00000524791 560 ntBASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 AC009407.1-201ENST00000568958 598 ntBASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDLIM7Q9NR12 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDLIM7Q9NR12 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms