Protein–RNA interactions for Protein: Q9NP31

SH2D2A, SH2 domain-containing protein 2A, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2AQ9NP31 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 KRT18P32-201ENST00000424695 1287 ntBASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 AL512356.2-201ENST00000546955 174 ntBASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 AC015911.4-201ENST00000588022 1070 ntBASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 LINC00628-201ENST00000628516 1289 ntBASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH2D2AQ9NP31 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 FOXO1B-201ENST00000504678 1527 ntBASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 UXT-AS1-201ENST00000590504 1525 ntBASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 AC105233.2-201ENST00000523697 349 ntBASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 AF228730.5-201ENST00000530288 346 ntBASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 SLC25A39P2-201ENST00000537614 270 ntBASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 AP001059.3-201ENST00000619053 235 ntBASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 AC093028.1-201ENST00000622998 982 ntBASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 GPAA1P2-202ENST00000606848 1787 ntBASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 AC073439.1-201ENST00000624121 1774 ntBASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 RNF216P1-203ENST00000404404 2427 ntBASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.13■□□□□ 0.01
SH2D2AQ9NP31 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SH2D2AQ9NP31 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms