Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.81■□□□□ 0.12
NEUROD4Q9HD90 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.81■□□□□ 0.12
NEUROD4Q9HD90 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.81■□□□□ 0.12
NEUROD4Q9HD90 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.81■□□□□ 0.12
NEUROD4Q9HD90 AC131009.4-201ENST00000624048 1740 ntBASIC15.81■□□□□ 0.12
NEUROD4Q9HD90 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NEUROD4Q9HD90 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.81■□□□□ 0.12
NEUROD4Q9HD90 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NEUROD4Q9HD90 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NEUROD4Q9HD90 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
NEUROD4Q9HD90 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 PMS2P1-201ENST00000431037 1228 ntBASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 RPS15P9-201ENST00000494093 319 ntBASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 OR7E14P-202ENST00000530490 1290 ntBASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 MIR4492-201ENST00000581627 80 ntBASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.8■□□□□ 0.12
NEUROD4Q9HD90 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 AL353732.1-201ENST00000569618 1459 ntBASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 KRT18P13-201ENST00000400056 1290 ntBASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 SLC25A6P2-201ENST00000497974 877 ntBASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 AC005412.3-201ENST00000580309 715 ntBASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 MIR1199-201ENST00000621445 119 ntBASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 AP001350.2-201ENST00000625104 1094 ntBASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NEUROD4Q9HD90 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NEUROD4Q9HD90 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms