Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 MIR943-201ENST00000401286 94 ntBASIC17.96■□□□□ 0.47
NXF3Q9H4D5 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 BCRP1-201ENST00000444246 691 ntBASIC17.96■□□□□ 0.47
NXF3Q9H4D5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.96■□□□□ 0.47
NXF3Q9H4D5 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NXF3Q9H4D5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.96■□□□□ 0.46
NXF3Q9H4D5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NXF3Q9H4D5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
NXF3Q9H4D5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NXF3Q9H4D5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 RARRES2P9-201ENST00000565168 469 ntBASIC17.95■□□□□ 0.46
NXF3Q9H4D5 MIR4453-201ENST00000584019 89 ntBASIC17.95■□□□□ 0.46
NXF3Q9H4D5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 LINC02084-201ENST00000606069 1096 ntBASIC17.95■□□□□ 0.46
NXF3Q9H4D5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NXF3Q9H4D5 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 TREML5P-201ENST00000421694 576 ntBASIC17.94■□□□□ 0.46
NXF3Q9H4D5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NXF3Q9H4D5 FAM8A3P-201ENST00000427218 844 ntBASIC17.94■□□□□ 0.46
NXF3Q9H4D5 AC093214.1-201ENST00000511688 1107 ntBASIC17.94■□□□□ 0.46
NXF3Q9H4D5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms