Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 RNU4-39P-201ENST00000362455 127 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 Y_RNA.263-201ENST00000364659 114 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 HLA-DQA1-203ENST00000395363 1206 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AREG-201ENST00000395748 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 LINC00339-201ENST00000404210 1189 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC006012.1-201ENST00000436600 691 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 IFT22-204ENST00000437644 875 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC011228.1-201ENST00000439027 757 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 ATP6AP1L-202ENST00000439350 758 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 ARAFP2-201ENST00000440565 559 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AL354872.1-201ENST00000456361 967 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 DUBR-204ENST00000490441 1149 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 IFT22-209ENST00000498704 917 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 ASNSP4-201ENST00000511103 447 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC091965.2-201ENST00000512324 613 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AP002453.2-201ENST00000533503 320 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AL118557.1-201ENST00000554408 440 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 MIR3915-201ENST00000578518 97 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 NDUFA8P1-201ENST00000605525 367 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC092028.1-203ENST00000608262 953 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AL031291.1-201ENST00000641979 742 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 IL24-207ENST00000611909 1621 ntTSL 3 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 AL157384.1-201ENST00000445995 2473 ntBASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 CCNB1IP1-201ENST00000353689 1305 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
KRTAP3-3Q9BYR6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 AC138470.1-201ENST00000624638 1897 ntBASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 AL645937.1-201ENST00000641739 1652 ntBASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 TAAR2-201ENST00000275191 1157 ntAPPRIS P3 BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 MSR1-203ENST00000355282 1167 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 RNU6-1242P-201ENST00000391052 103 ntBASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 HES6-204ENST00000409182 863 ntTSL 2 BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 RN7SKP279-201ENST00000411383 298 ntBASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 VTA1P1-201ENST00000414044 866 ntBASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 RPS7P9-201ENST00000414704 586 ntBASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC10.57□□□□□ -0.72
KRTAP3-3Q9BYR6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms