Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.36■□□□□ 0.37
LRRC3Q9BY71 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 AC092068.3-201ENST00000587894 2016 ntBASIC17.35■□□□□ 0.37
LRRC3Q9BY71 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRRC3Q9BY71 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 AC004890.2-204ENST00000481968 304 ntBASIC17.34■□□□□ 0.37
LRRC3Q9BY71 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 PRYP6-201ENST00000514804 343 ntBASIC17.34■□□□□ 0.37
LRRC3Q9BY71 IGHV3-42-201ENST00000520410 361 ntBASIC17.34■□□□□ 0.37
LRRC3Q9BY71 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRRC3Q9BY71 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC3Q9BY71 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC3Q9BY71 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
LRRC3Q9BY71 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC3Q9BY71 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.33■□□□□ 0.37
LRRC3Q9BY71 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC3Q9BY71 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC3Q9BY71 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LRRC3Q9BY71 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms