Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.25□□□□□ -0.45
MUC4Q99102 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.25□□□□□ -0.45
MUC4Q99102 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
MUC4Q99102 AP001269.4-201ENST00000609611 512 ntBASIC12.25□□□□□ -0.45
MUC4Q99102 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MUC4Q99102 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.25□□□□□ -0.45
MUC4Q99102 AC073592.4-201ENST00000623827 446 ntBASIC12.25□□□□□ -0.45
MUC4Q99102 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MUC4Q99102 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MUC4Q99102 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
MUC4Q99102 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
MUC4Q99102 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC12.24□□□□□ -0.45
MUC4Q99102 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.24□□□□□ -0.45
MUC4Q99102 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.24□□□□□ -0.45
MUC4Q99102 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
MUC4Q99102 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.24□□□□□ -0.45
MUC4Q99102 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.24□□□□□ -0.45
MUC4Q99102 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
MUC4Q99102 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
MUC4Q99102 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.24□□□□□ -0.45
MUC4Q99102 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC12.24□□□□□ -0.45
MUC4Q99102 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.24□□□□□ -0.45
MUC4Q99102 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.24□□□□□ -0.45
MUC4Q99102 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.24□□□□□ -0.45
MUC4Q99102 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.24□□□□□ -0.45
MUC4Q99102 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.24□□□□□ -0.45
MUC4Q99102 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.24□□□□□ -0.45
MUC4Q99102 AL355877.3-201ENST00000622820 899 ntBASIC12.24□□□□□ -0.45
MUC4Q99102 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.24□□□□□ -0.45
MUC4Q99102 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.24□□□□□ -0.45
MUC4Q99102 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
MUC4Q99102 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.24□□□□□ -0.45
MUC4Q99102 LINC00554-201ENST00000564841 3011 ntBASIC12.24□□□□□ -0.45
MUC4Q99102 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.24□□□□□ -0.45
MUC4Q99102 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.24□□□□□ -0.45
MUC4Q99102 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
MUC4Q99102 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.24□□□□□ -0.45
MUC4Q99102 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.24□□□□□ -0.45
MUC4Q99102 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MUC4Q99102 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC12.24□□□□□ -0.45
MUC4Q99102 AL671710.1-201ENST00000610245 2349 ntBASIC12.24□□□□□ -0.45
MUC4Q99102 PMS2P7-201ENST00000506558 1336 ntBASIC12.24□□□□□ -0.45
MUC4Q99102 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 AL356309.3-201ENST00000624132 1934 ntBASIC12.23□□□□□ -0.45
MUC4Q99102 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.23□□□□□ -0.45
MUC4Q99102 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.23□□□□□ -0.45
MUC4Q99102 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.23□□□□□ -0.45
MUC4Q99102 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.23□□□□□ -0.45
MUC4Q99102 AC087163.2-201ENST00000457299 853 ntBASIC12.23□□□□□ -0.45
MUC4Q99102 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.23□□□□□ -0.45
MUC4Q99102 PGAM5P1-201ENST00000518923 814 ntBASIC12.23□□□□□ -0.45
MUC4Q99102 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.23□□□□□ -0.45
MUC4Q99102 AF238378.1-201ENST00000526806 358 ntBASIC12.23□□□□□ -0.45
MUC4Q99102 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.23□□□□□ -0.45
MUC4Q99102 AP001005.1-201ENST00000571755 1248 ntBASIC12.23□□□□□ -0.45
MUC4Q99102 MIR5100-201ENST00000579544 119 ntBASIC12.23□□□□□ -0.45
MUC4Q99102 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.23□□□□□ -0.45
MUC4Q99102 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.23□□□□□ -0.45
MUC4Q99102 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.23□□□□□ -0.45
MUC4Q99102 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.23□□□□□ -0.45
MUC4Q99102 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.23□□□□□ -0.45
MUC4Q99102 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
MUC4Q99102 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
MUC4Q99102 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
MUC4Q99102 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.23□□□□□ -0.45
MUC4Q99102 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.23□□□□□ -0.45
MUC4Q99102 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.23□□□□□ -0.45
MUC4Q99102 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
MUC4Q99102 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms