Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.85□□□□□ -0.03
SPENQ96T58 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.85□□□□□ -0.03
SPENQ96T58 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 RNF216P1-203ENST00000404404 2427 ntBASIC14.84□□□□□ -0.03
SPENQ96T58 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 AL031731.1-201ENST00000642131 2094 ntBASIC14.84□□□□□ -0.03
SPENQ96T58 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.84□□□□□ -0.03
SPENQ96T58 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.84□□□□□ -0.03
SPENQ96T58 LINC02199-201ENST00000506655 2702 ntBASIC14.84□□□□□ -0.03
SPENQ96T58 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.84□□□□□ -0.03
SPENQ96T58 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.84□□□□□ -0.03
SPENQ96T58 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.84□□□□□ -0.03
SPENQ96T58 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.84□□□□□ -0.03
SPENQ96T58 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.84□□□□□ -0.03
SPENQ96T58 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.84□□□□□ -0.03
SPENQ96T58 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SPENQ96T58 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SPENQ96T58 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 AL035456.1-201ENST00000456064 1369 ntBASIC14.84□□□□□ -0.03
SPENQ96T58 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SPENQ96T58 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SPENQ96T58 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SPENQ96T58 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.84□□□□□ -0.03
SPENQ96T58 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPENQ96T58 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPENQ96T58 MSTO2P-201ENST00000314835 1709 ntBASIC14.83□□□□□ -0.03
SPENQ96T58 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPENQ96T58 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.83□□□□□ -0.03
SPENQ96T58 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SPENQ96T58 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SPENQ96T58 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.83□□□□□ -0.04
SPENQ96T58 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.83□□□□□ -0.04
SPENQ96T58 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SPENQ96T58 LINC01451-201ENST00000623792 534 ntBASIC14.83□□□□□ -0.04
SPENQ96T58 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SPENQ96T58 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.83□□□□□ -0.04
SPENQ96T58 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.83□□□□□ -0.04
SPENQ96T58 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.83□□□□□ -0.04
SPENQ96T58 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SPENQ96T58 AC060834.1-201ENST00000443027 2032 ntBASIC14.83□□□□□ -0.04
SPENQ96T58 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.83□□□□□ -0.04
SPENQ96T58 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.83□□□□□ -0.04
SPENQ96T58 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.83□□□□□ -0.04
SPENQ96T58 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SPENQ96T58 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.82□□□□□ -0.04
SPENQ96T58 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.82□□□□□ -0.04
SPENQ96T58 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.82□□□□□ -0.04
SPENQ96T58 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
SPENQ96T58 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 KRT8P44-201ENST00000441609 1350 ntBASIC14.82□□□□□ -0.04
SPENQ96T58 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.82□□□□□ -0.04
SPENQ96T58 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SPENQ96T58 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.82□□□□□ -0.04
SPENQ96T58 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SPENQ96T58 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.82□□□□□ -0.04
SPENQ96T58 AC092337.1-201ENST00000568699 1129 ntBASIC14.82□□□□□ -0.04
SPENQ96T58 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.82□□□□□ -0.04
SPENQ96T58 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.82□□□□□ -0.04
SPENQ96T58 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SPENQ96T58 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 HLA-H-201ENST00000383620 1096 ntBASIC14.82□□□□□ -0.04
SPENQ96T58 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPENQ96T58 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SPENQ96T58 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SPENQ96T58 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.82□□□□□ -0.04
SPENQ96T58 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.82□□□□□ -0.04
SPENQ96T58 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SPENQ96T58 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.82□□□□□ -0.04
SPENQ96T58 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.82□□□□□ -0.04
SPENQ96T58 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.82□□□□□ -0.04
SPENQ96T58 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.82□□□□□ -0.04
SPENQ96T58 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms