Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 RN7SL774P-201ENST00000577467 290 ntBASIC4.96□□□□□ -1.62
HMCN1Q96RW7 ECM1P1-201ENST00000604092 1279 ntBASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AC007663.3-201ENST00000609632 465 ntBASIC4.96□□□□□ -1.62
HMCN1Q96RW7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AC134312.5-201ENST00000568031 1313 ntBASIC4.96□□□□□ -1.62
HMCN1Q96RW7 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 HCG27-204ENST00000424675 895 ntTSL 3 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AC011742.3-201ENST00000439053 820 ntBASIC4.96□□□□□ -1.62
HMCN1Q96RW7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 RTN3P1-201ENST00000536295 711 ntBASIC4.96□□□□□ -1.62
HMCN1Q96RW7 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AC021016.3-201ENST00000608367 477 ntBASIC4.96□□□□□ -1.62
HMCN1Q96RW7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AL512324.3-201ENST00000619383 882 ntBASIC4.96□□□□□ -1.62
HMCN1Q96RW7 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 AC002472.4-201ENST00000641915 272 ntBASIC4.96□□□□□ -1.62
HMCN1Q96RW7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HMCN1Q96RW7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 TAC3-209ENST00000458521 816 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 AC019193.1-201ENST00000506678 823 ntBASIC4.95□□□□□ -1.62
HMCN1Q96RW7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 RN7SL48P-201ENST00000579283 293 ntBASIC4.95□□□□□ -1.62
HMCN1Q96RW7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 AC006158.1-201ENST00000610661 249 ntBASIC4.95□□□□□ -1.62
HMCN1Q96RW7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 AC100757.4-201ENST00000626934 759 ntBASIC4.95□□□□□ -1.62
HMCN1Q96RW7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 WASH7P-201ENST00000488147 1351 ntBASIC4.95□□□□□ -1.62
HMCN1Q96RW7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 INTS4P2-202ENST00000614726 2019 ntBASIC4.95□□□□□ -1.62
HMCN1Q96RW7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMCN1Q96RW7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms