Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NEK1Q96PY6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NEK1Q96PY6 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
NEK1Q96PY6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NEK1Q96PY6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEK1Q96PY6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEK1Q96PY6 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEK1Q96PY6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEK1Q96PY6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEK1Q96PY6 GPAA1P2-202ENST00000606848 1787 ntBASIC19.76■□□□□ 0.75
NEK1Q96PY6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEK1Q96PY6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEK1Q96PY6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEK1Q96PY6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 AL590627.1-203ENST00000421194 1026 ntBASIC19.76■□□□□ 0.75
NEK1Q96PY6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.76■□□□□ 0.75
NEK1Q96PY6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 AL031432.2-201ENST00000566714 459 ntBASIC19.76■□□□□ 0.75
NEK1Q96PY6 AL928711.1-201ENST00000570165 459 ntBASIC19.76■□□□□ 0.75
NEK1Q96PY6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 AL645728.2-201ENST00000641974 660 ntBASIC19.76■□□□□ 0.75
NEK1Q96PY6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NEK1Q96PY6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEK1Q96PY6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.76■□□□□ 0.75
NEK1Q96PY6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
NEK1Q96PY6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NEK1Q96PY6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 BX640515.1-201ENST00000617215 977 ntBASIC19.75■□□□□ 0.75
NEK1Q96PY6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
NEK1Q96PY6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NEK1Q96PY6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK1Q96PY6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK1Q96PY6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK1Q96PY6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.74■□□□□ 0.75
NEK1Q96PY6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK1Q96PY6 AC064836.3-201ENST00000607928 673 ntBASIC19.74■□□□□ 0.75
NEK1Q96PY6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK1Q96PY6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEK1Q96PY6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK1Q96PY6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NEK1Q96PY6 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEK1Q96PY6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEK1Q96PY6 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NEK1Q96PY6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms