Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AL645728.1-201ENST00000366221 2101 ntBASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 AC003101.2-201ENST00000612557 442 ntBASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 AJ011932.1-201ENST00000621707 465 ntBASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC20.67■□□□□ 0.9
CCDC85AQ96PX6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 AL645608.8-201ENST00000606034 2086 ntBASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 AC092580.3-201ENST00000430932 139 ntBASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCDC85AQ96PX6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 COX20P2-201ENST00000452636 358 ntBASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 PRYP6-201ENST00000514804 343 ntBASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 AC105233.2-201ENST00000523697 349 ntBASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 AC069120.2-201ENST00000524091 540 ntBASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 AF228730.5-201ENST00000530288 346 ntBASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 RARRES2P9-201ENST00000565168 469 ntBASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCDC85AQ96PX6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC85AQ96PX6 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CCDC85AQ96PX6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC85AQ96PX6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC85AQ96PX6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CCDC85AQ96PX6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCDC85AQ96PX6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC85AQ96PX6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC85AQ96PX6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.64■□□□□ 0.9
CCDC85AQ96PX6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 TSPY16P-201ENST00000449843 468 ntBASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 AL391256.1-201ENST00000443260 1855 ntBASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 AC073439.1-201ENST00000624121 1774 ntBASIC20.64■□□□□ 0.89
CCDC85AQ96PX6 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms