Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 AC018529.1-201ENST00000613063 361 ntBASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 AC073592.8-201ENST00000624126 511 ntBASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.92■□□□□ 0.62
SYNGAP1Q96PV0 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 KRT18P34-201ENST00000488218 1270 ntBASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 AL023806.1-201ENST00000603994 1649 ntBASIC18.91■□□□□ 0.62
SYNGAP1Q96PV0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 AC124947.2-201ENST00000547118 1133 ntBASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 AC007967.4-201ENST00000614700 386 ntBASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 AC092053.1-201ENST00000605787 1936 ntBASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SYNGAP1Q96PV0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SYNGAP1Q96PV0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 AC100757.3-201ENST00000622361 1406 ntBASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 MRPS18AP1-201ENST00000414458 589 ntBASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 CRB3P1-201ENST00000449338 276 ntBASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYNGAP1Q96PV0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms