Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 HLA-J-202ENST00000469281 1241 ntBASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 NPAP1P7-201ENST00000613027 823 ntBASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 PKD1P1-201ENST00000458669 6805 ntBASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CHAMP1Q96JM3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 MIR5100-201ENST00000579544 119 ntBASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 AC099336.1-202ENST00000602961 463 ntBASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.41■□□□□ 0.7
CHAMP1Q96JM3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 HCG4P8-203ENST00000443049 980 ntBASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 AC092119.3-201ENST00000612618 583 ntBASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 AL021920.2-201ENST00000624828 1351 ntBASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 AC013268.4-201ENST00000637413 2228 ntBASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.4■□□□□ 0.7
CHAMP1Q96JM3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHAMP1Q96JM3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHAMP1Q96JM3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CHAMP1Q96JM3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CHAMP1Q96JM3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CHAMP1Q96JM3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
CHAMP1Q96JM3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 AC013467.2-201ENST00000605472 835 ntBASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.39■□□□□ 0.69
CHAMP1Q96JM3 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms