Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 RNU1-129P-201ENST00000384064 167 ntBASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 AC096734.2-201ENST00000562054 433 ntBASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 U1.21-201ENST00000580816 167 ntBASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 AC021097.1-201ENST00000607902 574 ntBASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDLIM5Q96HC4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 AC009078.2-202ENST00000463353 338 ntBASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PDLIM5Q96HC4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.29■□□□□ 0.2
PDLIM5Q96HC4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms