Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 AC069335.1-201ENST00000489972 472 ntBASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 KRT8P23-201ENST00000560090 1207 ntBASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 AC093520.2-201ENST00000561830 333 ntBASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 AC073389.1-201ENST00000595595 795 ntBASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 AC027612.4-201ENST00000605371 583 ntBASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 AC020765.3-201ENST00000613051 740 ntBASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 AC008267.7-201ENST00000624570 1194 ntBASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 PKD1P1-201ENST00000458669 6805 ntBASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ECHDC3Q96DC8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 AL592309.1-201ENST00000443127 649 ntBASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 FLJ38576-201ENST00000623820 2459 ntBASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 GGT3P-204ENST00000453783 1664 ntBASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ECHDC3Q96DC8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
ECHDC3Q96DC8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ECHDC3Q96DC8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ECHDC3Q96DC8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 MIR346-201ENST00000362234 95 ntBASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 AL627223.1-201ENST00000416693 442 ntBASIC16.64■□□□□ 0.25
ECHDC3Q96DC8 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms