Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 MTHFR-217ENST00000641820 1569 ntBASIC16.13■□□□□ 0.17
VPS33AQ96AX1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 AC068587.6-202ENST00000641839 5619 ntBASIC16.13■□□□□ 0.17
VPS33AQ96AX1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 LINC00982-205ENST00000420957 435 ntBASIC16.13■□□□□ 0.17
VPS33AQ96AX1 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 KRT17P6-201ENST00000453795 1220 ntBASIC16.13■□□□□ 0.17
VPS33AQ96AX1 TOB2P1-201ENST00000469761 992 ntBASIC16.13■□□□□ 0.17
VPS33AQ96AX1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 TPSP2-201ENST00000561760 610 ntBASIC16.13■□□□□ 0.17
VPS33AQ96AX1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 AL121956.5-201ENST00000625261 221 ntBASIC16.13■□□□□ 0.17
VPS33AQ96AX1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
VPS33AQ96AX1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 AP002383.4-201ENST00000442518 975 ntBASIC16.12■□□□□ 0.17
VPS33AQ96AX1 TSSC2-201ENST00000450217 709 ntBASIC16.12■□□□□ 0.17
VPS33AQ96AX1 FAM86EP-206ENST00000510506 987 ntBASIC16.12■□□□□ 0.17
VPS33AQ96AX1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
VPS33AQ96AX1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 KRT8P49-201ENST00000604166 1432 ntBASIC16.11■□□□□ 0.17
VPS33AQ96AX1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VPS33AQ96AX1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms