Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 AC023274.1-201ENST00000418278 595 ntBASIC17.93■□□□□ 0.46
SEMA4DQ92854 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 PGAM5P1-201ENST00000518923 814 ntBASIC17.93■□□□□ 0.46
SEMA4DQ92854 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.93■□□□□ 0.46
SEMA4DQ92854 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SEMA4DQ92854 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 PDPK2P-202ENST00000562415 1191 ntBASIC17.92■□□□□ 0.46
SEMA4DQ92854 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 AL009183.1-201ENST00000603760 355 ntBASIC17.92■□□□□ 0.46
SEMA4DQ92854 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SEMA4DQ92854 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SEMA4DQ92854 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEMA4DQ92854 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SEMA4DQ92854 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEMA4DQ92854 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.91■□□□□ 0.46
SEMA4DQ92854 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms