Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
DDX1Q92499 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.77■□□□□ 0.44
DDX1Q92499 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX1Q92499 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX1Q92499 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX1Q92499 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.77■□□□□ 0.44
DDX1Q92499 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.77■□□□□ 0.44
DDX1Q92499 MIR4751-201ENST00000578027 74 ntBASIC17.77■□□□□ 0.44
DDX1Q92499 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.77■□□□□ 0.44
DDX1Q92499 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.77■□□□□ 0.44
DDX1Q92499 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.77■□□□□ 0.44
DDX1Q92499 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.77■□□□□ 0.44
DDX1Q92499 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX1Q92499 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
DDX1Q92499 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX1Q92499 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX1Q92499 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.77■□□□□ 0.43
DDX1Q92499 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX1Q92499 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
DDX1Q92499 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX1Q92499 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
DDX1Q92499 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
DDX1Q92499 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX1Q92499 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX1Q92499 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.77■□□□□ 0.43
DDX1Q92499 AC012569.1-201ENST00000591191 1524 ntBASIC17.77■□□□□ 0.43
DDX1Q92499 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DDX1Q92499 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
DDX1Q92499 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX1Q92499 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX1Q92499 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DDX1Q92499 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
DDX1Q92499 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 GPAA1P2-202ENST00000606848 1787 ntBASIC17.76■□□□□ 0.43
DDX1Q92499 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX1Q92499 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX1Q92499 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.76■□□□□ 0.43
DDX1Q92499 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
DDX1Q92499 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
DDX1Q92499 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX1Q92499 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.76■□□□□ 0.43
DDX1Q92499 MIR4515-201ENST00000584082 81 ntBASIC17.76■□□□□ 0.43
DDX1Q92499 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.76■□□□□ 0.43
DDX1Q92499 AP001350.2-201ENST00000625104 1094 ntBASIC17.76■□□□□ 0.43
DDX1Q92499 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DDX1Q92499 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
DDX1Q92499 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
DDX1Q92499 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX1Q92499 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.76■□□□□ 0.43
DDX1Q92499 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DDX1Q92499 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
DDX1Q92499 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX1Q92499 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DDX1Q92499 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX1Q92499 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX1Q92499 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
DDX1Q92499 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.75■□□□□ 0.43
DDX1Q92499 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
DDX1Q92499 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX1Q92499 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 HMGA1P7-201ENST00000406908 502 ntBASIC17.75■□□□□ 0.43
DDX1Q92499 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.75■□□□□ 0.43
DDX1Q92499 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.75■□□□□ 0.43
DDX1Q92499 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX1Q92499 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.75■□□□□ 0.43
DDX1Q92499 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX1Q92499 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX1Q92499 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX1Q92499 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX1Q92499 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.75■□□□□ 0.43
DDX1Q92499 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DDX1Q92499 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.75■□□□□ 0.43
DDX1Q92499 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms