Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 AL359075.1-203ENST00000462729 1002 ntBASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 AC073592.5-201ENST00000624854 528 ntBASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 AC016027.1-202ENST00000607927 1699 ntBASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CKAP2Q8WWK9 AL031731.1-201ENST00000642131 2094 ntBASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 AC069224.1-201ENST00000566372 1715 ntBASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 RN7SL606P-201ENST00000472779 293 ntBASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CKAP2Q8WWK9 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 HBZP1-201ENST00000354915 429 ntBASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CKAP2Q8WWK9 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms