Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 POU5F1P6-201ENST00000466990 990 ntBASIC17.85■□□□□ 0.45
LMO3Q8TAP4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 AC140113.2-201ENST00000604370 208 ntBASIC17.85■□□□□ 0.45
LMO3Q8TAP4 AL513190.1-201ENST00000621254 727 ntBASIC17.85■□□□□ 0.45
LMO3Q8TAP4 AC092919.2-201ENST00000623631 1645 ntBASIC17.85■□□□□ 0.45
LMO3Q8TAP4 AC092865.6-201ENST00000642101 219 ntBASIC17.85■□□□□ 0.45
LMO3Q8TAP4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.85■□□□□ 0.45
LMO3Q8TAP4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 ZNF259P1-201ENST00000407656 1365 ntBASIC17.84■□□□□ 0.45
LMO3Q8TAP4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 AL596087.1-201ENST00000400979 1969 ntBASIC17.84■□□□□ 0.45
LMO3Q8TAP4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.84■□□□□ 0.45
LMO3Q8TAP4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.83■□□□□ 0.45
LMO3Q8TAP4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LMO3Q8TAP4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LMO3Q8TAP4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LMO3Q8TAP4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
LMO3Q8TAP4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.83■□□□□ 0.45
LMO3Q8TAP4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
LMO3Q8TAP4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.83■□□□□ 0.45
LMO3Q8TAP4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
LMO3Q8TAP4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
LMO3Q8TAP4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LMO3Q8TAP4 AL513523.2-202ENST00000427283 2040 ntBASIC17.83■□□□□ 0.45
LMO3Q8TAP4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.83■□□□□ 0.44
LMO3Q8TAP4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms