Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 AC021097.1-201ENST00000607902 574 ntBASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 AC092171.3-201ENST00000610122 2651 ntBASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RASGEF1AQ8N9B8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 AC009053.2-201ENST00000563701 2365 ntBASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 HLA-J-202ENST00000469281 1241 ntBASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 YBX1P5-201ENST00000509441 847 ntBASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 MIR4469-201ENST00000583919 79 ntBASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 AC055717.3-201ENST00000622967 595 ntBASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 ELL2P1-201ENST00000413990 1906 ntBASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RASGEF1AQ8N9B8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.42■□□□□ 0.22
RASGEF1AQ8N9B8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms