Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AL121912.1-201ENST00000603683 238 ntBASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AC008667.4-201ENST00000607370 168 ntBASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AC008735.5-201ENST00000623544 497 ntBASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 AC129492.6-201ENST00000611383 1305 ntBASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LSMEM1Q8N8F7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 CYP2T1P-202ENST00000641596 2535 ntBASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 AC018712.1-201ENST00000455767 687 ntBASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 AC107918.2-201ENST00000530817 355 ntBASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 PGM5P2-202ENST00000637225 1043 ntBASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 AC099063.4-201ENST00000641099 1602 ntBASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LSMEM1Q8N8F7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
LSMEM1Q8N8F7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.33■□□□□ 0.05
LSMEM1Q8N8F7 AL353732.1-201ENST00000569618 1459 ntBASIC15.33■□□□□ 0.05
LSMEM1Q8N8F7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LSMEM1Q8N8F7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.33■□□□□ 0.05
LSMEM1Q8N8F7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
LSMEM1Q8N8F7 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
LSMEM1Q8N8F7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LSMEM1Q8N8F7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
LSMEM1Q8N8F7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
LSMEM1Q8N8F7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 FAM197Y8-203ENST00000450145 560 ntBASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 EMBP1-201ENST00000458200 901 ntBASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 IGHV3-65-201ENST00000523210 341 ntBASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 TP73-AS1-207ENST00000624167 988 ntBASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LSMEM1Q8N8F7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms