Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 AC026120.1-201ENST00000611536 926 ntBASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 GGT4P-201ENST00000623672 1708 ntBASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 GPAA1P2-202ENST00000606848 1787 ntBASIC16.49■□□□□ 0.23
TRAM1L1Q8N609 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 AL135744.1-201ENST00000565098 629 ntBASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 AC020765.3-201ENST00000613051 740 ntBASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 AC055717.3-201ENST00000622967 595 ntBASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 FLJ38576-201ENST00000623820 2459 ntBASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAM1L1Q8N609 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 PCDHA12-202ENST00000613593 2588 ntBASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 SPDYE11-202ENST00000450699 704 ntBASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 SPDYE9P-201ENST00000570642 692 ntBASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 SPDYE10P-202ENST00000612005 668 ntBASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 SPDYE8P-202ENST00000612377 668 ntBASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 NKILA-202ENST00000614771 2598 ntBASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAM1L1Q8N609 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAM1L1Q8N609 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms