Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 KRT18P2-201ENST00000447938 1258 ntBASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 PDPK2P-202ENST00000562415 1191 ntBASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB42Q8N4Z0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB42Q8N4Z0 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
RAB42Q8N4Z0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB42Q8N4Z0 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
RAB42Q8N4Z0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB42Q8N4Z0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 PMS2P4-201ENST00000412466 1052 ntBASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 AC074386.1-202ENST00000463561 864 ntBASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 MIR3909-201ENST00000579518 119 ntBASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 AC068137.2-201ENST00000605408 478 ntBASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 AC021097.1-201ENST00000607902 574 ntBASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 KRT8P39-201ENST00000396270 1433 ntBASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB42Q8N4Z0 AL645728.1-201ENST00000366221 2101 ntBASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 HMGA1P7-201ENST00000406908 502 ntBASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.25■□□□□ 0.19
RAB42Q8N4Z0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms