Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AP001350.2-201ENST00000625104 1094 ntBASIC17.09■□□□□ 0.33
SIX5Q8N196 AC087499.5-201ENST00000452760 1342 ntBASIC17.09■□□□□ 0.33
SIX5Q8N196 FLJ13224-201ENST00000313737 1514 ntBASIC17.09■□□□□ 0.33
SIX5Q8N196 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.09■□□□□ 0.33
SIX5Q8N196 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX5Q8N196 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SIX5Q8N196 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
SIX5Q8N196 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SIX5Q8N196 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.09■□□□□ 0.33
SIX5Q8N196 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SIX5Q8N196 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIX5Q8N196 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIX5Q8N196 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SIX5Q8N196 CROCCP1-201ENST00000426910 5675 ntBASIC17.09■□□□□ 0.33
SIX5Q8N196 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIX5Q8N196 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SIX5Q8N196 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SIX5Q8N196 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIX5Q8N196 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
SIX5Q8N196 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIX5Q8N196 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIX5Q8N196 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SIX5Q8N196 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIX5Q8N196 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
SIX5Q8N196 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIX5Q8N196 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SIX5Q8N196 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.08■□□□□ 0.32
SIX5Q8N196 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.08■□□□□ 0.32
SIX5Q8N196 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX5Q8N196 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIX5Q8N196 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.08■□□□□ 0.32
SIX5Q8N196 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.08■□□□□ 0.32
SIX5Q8N196 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.08■□□□□ 0.32
SIX5Q8N196 AC132938.2-201ENST00000579188 680 ntBASIC17.08■□□□□ 0.32
SIX5Q8N196 AL591163.1-201ENST00000641757 987 ntBASIC17.08■□□□□ 0.32
SIX5Q8N196 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX5Q8N196 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.08■□□□□ 0.32
SIX5Q8N196 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SIX5Q8N196 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX5Q8N196 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIX5Q8N196 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SIX5Q8N196 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX5Q8N196 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX5Q8N196 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIX5Q8N196 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIX5Q8N196 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.08■□□□□ 0.32
SIX5Q8N196 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SIX5Q8N196 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIX5Q8N196 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.08■□□□□ 0.32
SIX5Q8N196 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.07■□□□□ 0.32
SIX5Q8N196 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
SIX5Q8N196 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SIX5Q8N196 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.07■□□□□ 0.32
SIX5Q8N196 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 AL035456.1-201ENST00000456064 1369 ntBASIC17.07■□□□□ 0.32
SIX5Q8N196 CETN4P-206ENST00000642099 2168 ntBASIC17.07■□□□□ 0.32
SIX5Q8N196 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SIX5Q8N196 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 MIR658-201ENST00000385210 100 ntBASIC17.07■□□□□ 0.32
SIX5Q8N196 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SIX5Q8N196 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.07■□□□□ 0.32
SIX5Q8N196 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.07■□□□□ 0.32
SIX5Q8N196 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.07■□□□□ 0.32
SIX5Q8N196 MTND6P24-201ENST00000440466 518 ntBASIC17.07■□□□□ 0.32
SIX5Q8N196 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SIX5Q8N196 GNAQP1-201ENST00000444815 1067 ntBASIC17.07■□□□□ 0.32
SIX5Q8N196 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.07■□□□□ 0.32
SIX5Q8N196 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.07■□□□□ 0.32
SIX5Q8N196 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SIX5Q8N196 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.07■□□□□ 0.32
SIX5Q8N196 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.07■□□□□ 0.32
SIX5Q8N196 AL844908.2-201ENST00000609461 460 ntBASIC17.07■□□□□ 0.32
SIX5Q8N196 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.07■□□□□ 0.32
SIX5Q8N196 AC004840.1-201ENST00000636359 365 ntBASIC17.07■□□□□ 0.32
SIX5Q8N196 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
SIX5Q8N196 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.07■□□□□ 0.32
SIX5Q8N196 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.07■□□□□ 0.32
SIX5Q8N196 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SIX5Q8N196 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIX5Q8N196 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.07■□□□□ 0.32
SIX5Q8N196 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SIX5Q8N196 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SIX5Q8N196 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIX5Q8N196 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms