Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 FOSL1P1-201ENST00000511041 816 ntBASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC50Q8IVM0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 AC006449.5-201ENST00000610658 2098 ntBASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 HYMAI-201ENST00000635591 3347 ntBASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCDC50Q8IVM0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 AC092364.2-201ENST00000596710 2692 ntBASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 AC243591.1-201ENST00000452967 1364 ntBASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 AP002414.1-201ENST00000391405 1147 ntBASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 MIR1224-201ENST00000408193 85 ntBASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 AL732292.2-201ENST00000609649 430 ntBASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 AL136379.1-201ENST00000623471 2642 ntBASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCDC50Q8IVM0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms