Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CROCCP3Q8IVE0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CROCCP3Q8IVE0 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.21■□□□□ 0.02
CROCCP3Q8IVE0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CROCCP3Q8IVE0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CROCCP3Q8IVE0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CROCCP3Q8IVE0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CROCCP3Q8IVE0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CROCCP3Q8IVE0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.21■□□□□ 0.02
CROCCP3Q8IVE0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CROCCP3Q8IVE0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 CRYGFP-201ENST00000418459 633 ntBASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 AC002558.1-201ENST00000488906 803 ntBASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 AL023803.3-201ENST00000615559 522 ntBASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CROCCP3Q8IVE0 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 AL135905.2-201ENST00000584934 1404 ntBASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 RNA5SP413-201ENST00000516373 109 ntBASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 AC015656.1-201ENST00000624209 3578 ntBASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CROCCP3Q8IVE0 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms