Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.73■□□□□ 0.43
RNF135Q8IUD6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 AC108860.2-201ENST00000562760 2183 ntBASIC17.72■□□□□ 0.43
RNF135Q8IUD6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 KRT8P23-201ENST00000560090 1207 ntBASIC17.72■□□□□ 0.43
RNF135Q8IUD6 LINC01225-203ENST00000563550 1244 ntBASIC17.72■□□□□ 0.43
RNF135Q8IUD6 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 AL606495.2-201ENST00000605867 535 ntBASIC17.72■□□□□ 0.43
RNF135Q8IUD6 AC004233.3-201ENST00000607794 1269 ntBASIC17.72■□□□□ 0.43
RNF135Q8IUD6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF135Q8IUD6 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 SLC25A6P2-201ENST00000497974 877 ntBASIC17.71■□□□□ 0.43
RNF135Q8IUD6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF135Q8IUD6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF135Q8IUD6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF135Q8IUD6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF135Q8IUD6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF135Q8IUD6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.42
RNF135Q8IUD6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 AL139327.4-201ENST00000612362 153 ntBASIC17.7■□□□□ 0.42
RNF135Q8IUD6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF135Q8IUD6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms