Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 FZD10-202ENST00000539839 3282 ntBASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
OTOP1Q7RTM1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 REXO1L6P-201ENST00000603433 1515 ntBASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 FAM86MP-201ENST00000340703 885 ntBASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 RNU1-129P-201ENST00000384064 167 ntBASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 FAM8A2P-201ENST00000528813 1142 ntBASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 WASH4P-201ENST00000564273 1246 ntBASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 U1.21-201ENST00000580816 167 ntBASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 APOC4-201ENST00000591600 348 ntTSL 3 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 SPTSSB-204ENST00000617024 1292 ntBASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
OTOP1Q7RTM1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.21■□□□□ 0.66
OTOP1Q7RTM1 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 AC087499.6-201ENST00000411576 835 ntBASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
OTOP1Q7RTM1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 AL391825.1-201ENST00000457671 1364 ntBASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
OTOP1Q7RTM1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms