Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.79■□□□□ 0.44
CNKSR3Q6P9H4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 AL589702.1-201ENST00000641229 1509 ntBASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 AC022210.1-201ENST00000449856 793 ntBASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNKSR3Q6P9H4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 ELK1P1-201ENST00000485699 580 ntBASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 AC123567.1-201ENST00000548294 1261 ntBASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 AC023310.3-201ENST00000557027 670 ntBASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 AC100756.1-201ENST00000562736 682 ntBASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 AC138749.3-201ENST00000567691 622 ntBASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 AC116165.1-201ENST00000611806 668 ntBASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 MIR6069-201ENST00000620069 79 ntBASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CNKSR3Q6P9H4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNKSR3Q6P9H4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNKSR3Q6P9H4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNKSR3Q6P9H4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNKSR3Q6P9H4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.77■□□□□ 0.43
CNKSR3Q6P9H4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.77■□□□□ 0.43
CNKSR3Q6P9H4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNKSR3Q6P9H4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CNKSR3Q6P9H4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.77■□□□□ 0.43
CNKSR3Q6P9H4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 AC020765.3-201ENST00000613051 740 ntBASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 AL109936.8-201ENST00000641772 604 ntBASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 AL139011.1-202ENST00000642063 584 ntBASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.76■□□□□ 0.43
CNKSR3Q6P9H4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNKSR3Q6P9H4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms